I don't think it's right on Musharraf's part to say that both sides have extremists. India has never been a land of punitive violence. We've been secular genetically.
If he is trying to refer to some organisations like RSS, Sena, etc. then we need to make it clear that the philosophy of these organisations is totally different from the Brutal and coward acts of Al-Qaeda, Hizbul, SIMI, etc.
It's important to clarify that Indian fundamentalists (if any) operate and self defence concept rather than intrusion. We believe in "Live and Let Live".
Hope Mr. Musharraf turns to pages in history and see how India has welcomed any community with Grace and Honour.